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Confocal laser scanning microscopy (CLSM) is a useful research tool to explore the exopolysaccharides (EPS) in bacterial biofilms. Here, we describe the analysis of different biofilms of
Myxococcus xanthus
formed in a modified chamber slide system with CLSM. In conjunction with several specific fluorescent probes, the EPS within
M. xanthus
biofilms can be visualized and analyzed in situ.